Non-genetic mechanisms of ancestral origin involved in cancer drug resistance
Cancer progression is commonly attributed to the stepwise accumulation of somatic mutations; however, this framework does not fully account for the regulated and recurrent nature of many tumor-associated phenotypes. Here, we advance an evolutionary systems perspective in which cancer reflects the partial reactivation of conserved cellular programs that predate multicellularity. The present paper identifies conceptual and functional parallels between the cancer life cycle and that of protists, particularly parasitic species that inhabit comparable microenvironmental niches within host organisms. These parallels suggest a potential evolutionary continuity linked to a common ancestor of metazoans and amoebozoans. We hypothesize that adaptive traits originating in early historic environments—especially mechanisms conferring tolerance to oxidative stress—have been retained in the genomes of modern metazoans. Reactivation of these traits may contribute to tumor survival and progression under adverse conditions. Importantly, the occurrence of intrinsic and multidrug resistance in untreated tumors indicates that resistance is not exclusively induced by therapeutic exposure. Instead, it may arise from conserved, non-genetic stress-response programs that are activated by the tumor microenvironment. This framework provides a basis for reinterpreting cancer drug resistance as an evolutionarily embedded mechanism rather than a purely treatment-driven outcome.
- Niculescu VF. From multicellular constraint to unicellular control: Ancient mechanisms of genome reconstruction, repair, and expansion in cancer evolution. Cancer Plus. 2025;7(3):42-72. doi: 10.36922/CP025160028
- Niculescu VF. Non-genetic mechanisms in cancer evolution: senescence, unicellularization, and cycles of stemness recovery. Acad Mol Biol Genom. 2025;2(2). doi: 10.20935/AcadMolBioGen7755.
- Niculescu VF. Reevaluating cancer stem cells and polyploid giant cancer cells from the evolutionary cancer cell biology perspective. Cancer Plus. 2024;6(4):3970. doi: 10.36922/cp.3970.
- Niculescu VF. Understanding cancer from an evolutionary perspective: high-risk reprogramming of genome-damaged stem cells. Acad Med. 2024;1(1). doi: 10.20935/AcadMed6168.
- Adrian-Kalchhauser I, Sultan SE, Shama LNS, et al. Understanding non-genetic inheritance: insights from molecular-evolutionary crosstalk. Trends Ecol Evol. 2020;35(12):1078-1089. doi: 10.1016/j.tree.2020.08.011
- Weiner AKM, Katz LA. Epigenetics as driver of adaptation and diversification in microbial eukaryotes. Front Genet. 2021;12:642220. doi: 10.3389/fgene.2021.642220
- Jiang Y, Chen X, Wang C, et al. Genes and proteins expressed at different life cycle stages in the model protist Euplotes vannus revealed by transcriptomic and proteomic approaches. Sci China Life Sci. 2025;68(1):232-248. doi: 10.1007/s11427-023-2605-9
- Chen X, Bracht JR, Goldman AD, et al. The architecture of a scrambled genome reveals massive levels of genomic rearrangement during development. Cell. 2014;158(5):1187- 1198. doi: 10.1016/j.cell.2014.07.034
- Swart EC, Wilkes CD, Sandoval PY, Arambasic M, Sperling L, Nowacki M. Genome-wide analysis of genetic and epigenetic control of programmed DNA deletion. Nucleic Acids Res. 2014;42(14):8970-8983. doi: 10.1093/nar/gku619
- Moon EK, Hong Y, Lee HA, Quan FS, Kong HH. DNA methylation of gene expression in Acanthamoeba castellanii encystation. Korean J Parasitol. 2017;55(2):115-120. doi: 10.3347/kjp.2017.55.2.115
- Lagunas-Rangel FA, Bermudez-Cruz RM. Epigenetics in the early divergent eukaryotic Giardia duodenalis: an update. Biochimie. 2019;156:123-128. doi: 10.1016/j.biochi.2018.10.008
- Castonguay E, Angers B. The key role of epigenetics in the persistence of asexual lineages. Genet Res Int. 2012;2012:534289. doi: 10.1155/2012/534289
- Danchin E, Pocheville A, Rey O, Pujol B, Blanchet S. Epigenetically facilitated mutational assimilation: epigenetics as a hub within the inclusive evolutionary synthesis. Biol Rev. 2018;94(1):259-282. doi: 10.1111/brv.12453
- McNamara JM, Dall SRX, Hammerstein P, Leimar O. Detection vs. selection: integration of genetic, epigenetic and environmental cues in fluctuating environments. Coulson T, ed. Ecol Lett. 2016;19(10):1267-1276. doi: 10.1111/ele.12663
- Verhoeven KJF, Preite V. Epigenetic variation in asexually reproducing organisms. Evolution. 2014;68(3):644-655. doi: 10.1111/evo.12320
- Sultan SE. Organism and Environment: Ecological Development, Niche Construction, and Adaptation. Oxford: Oxford University Press; 2015.
- Blake GET, Watson ED. Unravelling the complex mechanisms of transgenerational epigenetic inheritance. Curr Opin Chem Biol. 2016;33:101-107. doi: 10.1016/j.cbpa.2016.06.008
- Perez MF, Lehner B. Intergenerational and transgenerational epigenetic inheritance in animals. Nat Cell Biol. 2019;21(2):143-151. doi: 10.1038/s41556-018-0242-9
- Quadrana L, Colot V. Plant transgenerational epigenetics. Annu Rev Genet. 2016;50(1):467-491. doi: 10.1146/annurev-genet-120215-035254
- Laland K, Uller T, Feldman M, et al. Does evolutionary theory need a rethink? Nature. 2014;514(7521):161-164. doi: 10.1038/514161a
- Bond DM, Finnegan EJ. Passing the message on: inheritance of epigenetic traits. Trends Plant Sci. 2007;12(5):211-216. doi: 10.1016/j.tplants.2007.03.010
- Pilling OA, Rogers AJ, Gulla-Devaney B, Katz LA. Insights into transgenerational epigenetics from studies of ciliates. Eur J Protistol. 2017;61:366-375. doi: 10.1016/j.ejop.2017.05.004
- Neeb ZT, Nowacki M. RNA-mediated transgenerational inheritance in ciliates and plants. Chromosoma. 2017;127(1):19-27. doi: 10.1007/s00412-017-0655-4
- Charlesworth D, Barton NH, Charlesworth B. The sources of adaptive variation. Proc R Soc B. 2017;284(1855):20162864. doi: 10.1098/rspb.2016.2864
- Salinas S, Brown SC, Mangel M, Munch SB. Non-genetic inheritance and changing environments. Non-Genet Inherit. 2013;1. doi: 10.2478/ngi-2013-0005
- Maestripieri D, Mateo JM, eds. Maternal Effects in Mammals. Chicago: University of Chicago Press; 2009.
- Badyaev AV, Uller T. Parental effects in ecology and evolution: mechanisms, processes and implications. Philos Trans R Soc Lond B Biol Sci. 2009;364(1520):1169-1177. doi: 10.1098/rstb.2008.0302
- Feng JX, Riddle NC. Epigenetics and genome stability. Mamm Genome. 2020;31(5-6):181-195. doi: 10.1007/s00335-020-09836-2
- Kim JJ, Lee SY, Miller KM. Preserving genome integrity and function: the DNA damage response and histone modifications. Crit Rev Biochem Mol Biol. 2019;54(3):208- 241. doi: 10.1080/10409238.2019.1620676
- Laisné M, Lupien M, Vallot C. Epigenomic heterogeneity as a source of tumour evolution. Nat Rev Cancer. 2025;25(1):7- 26. doi: 10.1038/s41568-024-00757-9
- Peña CJ. Epigenetic regulation of brain development, plasticity, and response to early-life stress. Neuropsychopharmacology. 2026;51(1):5-15. doi: 10.1038/s41386-025-02179-z
- Romero-Mujalli D, Fuchs LIR, Haase M, Hildebrandt JP, Weissing FJ, Revilla TA. Emergence of phenotypic plasticity through epigenetic mechanisms. Evol Lett. 2024;8(4):561- 574. doi: 10.1093/evlett/qrae012
- Galassi C, Manic G, Esteller M, Galluzzi L, Vitale I. Epigenetic regulation of cancer stemness. Signal Transduct Target Ther. 2025;10(1):243. doi: 10.1038/s41392-025-02340-6
- Sherif ZA, Ogunwobi OO, Ressom HW. Mechanisms and technologies in cancer epigenetics. Front Oncol. 2025;14:1513654. doi: 10.3389/fonc.2024.1513654
- Yu X, Zhao H, Wang R, et al. Cancer epigenetics: from laboratory studies and clinical trials to precision medicine. Cell Death Discov. 2024;10(1):28. doi: 10.1038/s41420-024-01803-z
- Herceg Z, Ghantous A, Gheit T, et al. Cancer epigenetics: unraveling etiology and mechanisms to advance prevention. JNCI Monogr. 2026;2026(72):44-58. doi: 10.1093/jncimonographs/lgaf044
- Turna S, Demokan S. Epigenetic alterations in cancer metastasis: molecular mechanisms and implications for precision oncology. Front Oncol. 2026;16. doi: 10.3389/fonc.2026.1788808
- Marine JC, Dawson SJ, Dawson MA. Non-genetic mechanisms of therapeutic resistance in cancer. Nat Rev Cancer. 2020;20(12):743-756. doi: 10.1038/s41568-020-00302-4
- Pillai M, Hojel E, Jolly MK, Goyal Y. Unraveling non-genetic heterogeneity in cancer with dynamical models and computational tools. Nat Comput Sci. 2023;3(4):301-313. doi: 10.1038/s43588-023-00427-0
- Wessel GM, Morita S, Oulhen N. Somatic cell conversion to a germ cell lineage: a violation or a revelation? J Exp Zool B Mol Dev Evol. 2021;336(8):666-679. doi: 10.1002/jez.b.22952
- Cinalli RM, Rangan P, Lehmann R. Germ cells are forever. Cell. 2008;132(4):559-562. doi: 10.1016/j.cell.2008.02.003
- Chong S, Whitelaw E. Epigenetic germline inheritance. Curr Opin Genet Dev. 2004;14(6):692-696. doi: 10.1016/j.gde.2004.09.001
- Kimmins S, Sassone-Corsi P. Chromatin remodelling and epigenetic features of germ cells. Nature. 2005;434(7033):583- 589. doi: 10.1038/nature03368
- Eun SH, Gan Q, Chen X. Epigenetic regulation of germ cell differentiation. Curr Opin Cell Biol. 2010;22(6):737-743. doi: 10.1016/j.ceb.2010.09.004
- Li J, Hu J, Yang Y, et al. Drug resistance in cancer: molecular mechanisms and emerging treatment strategies. Mol Biomed. 2025;6(1):111. doi: 10.1186/s43556-025-00352-w
- Bell CC, Gilan O. Principles and mechanisms of non-genetic resistance in cancer. Br J Cancer. 2020;122(4):465-472. doi: 10.1038/s41416-019-0648-6
- Lei ZN, Tian Q, Teng QX, et al. Understanding and targeting resistance mechanisms in cancer. MedComm. 2023;4(3):e265. doi: 10.1002/mco2.265
- Khan SU, Fatima K, Aisha S, Malik F. Unveiling the mechanisms and challenges of cancer drug resistance. Cell Commun Signal. 2024;22(1):109. doi: 10.1186/s12964-023-01302-1
- Turajlic S, Furney SJ, Stamp G, et al. Whole-genome sequencing reveals complex mechanisms of intrinsic resistance to BRAF inhibition. Ann Oncol. 2014;25(5):959- 967. doi: 10.1093/annonc/mdu049
- Ma Y, Wang L, Neitzel LR, et al. The MAPK pathway regulates intrinsic resistance to BET inhibitors in colorectal cancer. Clin Cancer Res. 2017;23(8):2027-2037. doi: 10.1158/1078-0432.CCR-16-0453
- Kalbasi A, Ribas A. Tumour-intrinsic resistance to immune checkpoint blockade. Nat Rev Immunol. 2020;20(1):25-39. doi: 10.1038/s41577-019-0218-4
- Wicki A, Mandala M, Massi D, et al. Acquired resistance to clinical cancer therapy: a twist in physiological signaling. Physiol Rev. 2016;96(3):805-829. doi: 10.1152/physrev.00024.2015
- Saleh R, Elkord E. Acquired resistance to cancer immunotherapy: role of tumor-mediated immunosuppression. Adv Cancer Res. 2020;65:13-27. doi: 10.1016/j.semcancer.2019.07.017
- Meador CB, Hata AN. Acquired resistance to targeted therapies in NSCLC: updates and evolving insights. Pharmacol Ther. 2020;210:107522. doi: 10.1016/j.pharmthera.2020.107522
- Lu J, Li J, Lin Z, et al. Reprogramming of TAMs via the STAT3/CD47-SIRPα axis promotes acquired resistance to EGFR-TKIs in lung cancer. Cancer Lett. 2023;564:216205. doi: 10.1016/j.canlet.2023.216205
- Hu X, Zhang Z. Understanding the genetic mechanisms of cancer drug resistance using genomic approaches. Trends Genet. 2016;32(2):127-137. doi: 10.1016/j.tig.2015.11.003
- Kara A, Ozgur A, Nalbantoglu S, Karadag A. DNA repair pathways and their roles in drug resistance for lung adenocarcinoma. Mol Biol Rep. 2021;48(4):3813-3825. doi: 10.1007/s11033-021-06314-z
- Damia G, Broggini M. Platinum resistance in ovarian cancer: role of DNA repair. Cancers. 2019;11(1):119. doi: 10.3390/cancers11010119
- Dzobo K, Senthebane DA, Thomford NE, et al. Not everyone fits the mold: intratumor and intertumor heterogeneity and innovative cancer drug design and development. OMICS. 2018;22(1):17-34. doi: 10.1089/omi.2017.0174
- Labrie M, Brugge JS, Mills GB, Zervantonakis IK. Therapy resistance: opportunities created by adaptive responses to targeted therapies in cancer. Nat Rev Cancer. 2022;22(6):323- 339. doi: 10.1038/s41568-022-00454-5
- Nussinov R, Tsai CJ, Jang H. Anticancer drug resistance: an update and perspective. Drug Resist Updat. 2021;59:100796. doi: 10.1016/j.drup.2021.100796
- Senthebane DA, Rowe A, Thomford NE, et al. The role of tumor microenvironment in chemoresistance: to survive, keep your enemies closer. Int J Mol Sci. 2017;18(7):1586. doi: 10.3390/ijms18071586
- Khan SU, Fatima K, Malik F, Kalkavan H, Wani A. Cancer metastasis: molecular mechanisms and clinical perspectives. Pharmacol Ther. 2023;250:108522. doi: 10.1016/j.pharmthera.2023.108522
- Adhikari S, Bhattacharya A, Adhikary S, et al. The paradigm of drug resistance in cancer: an epigenetic perspective. Biosci Rep. 2022;42(4). doi: 10.1042/BSR20211812
- Menon DR, Hammerlindl H, Torrano J, Schaider H, Fujita M. Epigenetics and metabolism at the crossroads of stress-induced plasticity, stemness and therapeutic resistance in cancer. Theranostics. 2020;10(14):6261-6277. doi: 10.7150/thno.42523
- Dawson MA, Kouzarides T. Cancer epigenetics: from mechanism to therapy. Cell. 2012;150(1):12-27. doi: 10.1016/j.cell.2012.06.013
- Lee TI, Young RA. Transcriptional regulation and its misregulation in disease. Cell. 2013;152(6):1237-1251. doi: 10.1016/j.cell.2013.02.014
- Aydin B, Mazzoni EO. Cell reprogramming: the many roads to success. Annu Rev Cell Dev Biol. 2019;35(1):433-452. doi: 10.1146/annurev-cellbio-100818-125127
- Poetsch AR, Plass C. Transcriptional regulation by DNA methylation. Cancer Treat Rev. 2011;37(Suppl 1):S8-S12. doi: 10.1016/j.ctrv.2011.04.010
- Zhao LY, Song J, Liu Y, Song CX, Yi C. Mapping the epigenetic modifications of DNA and RNA. Protein Cell. 2020;11(11):792-808. doi: 10.1007/s13238-020-00733-7
- Bushweller JH. Targeting transcription factors in cancer—from undruggable to reality. Nat Rev Cancer. 2019;19(11):611-624. doi: 10.1038/s41568-019-0196-7
- Vaidya FU, Chhipa AS, Mishra V, et al. Molecular and cellular paradigms of multidrug resistance in cancer. Cancer Rep. 2022;5(12):e1291. doi: 10.1002/cnr2.1291
- Wilting RH, Dannenberg JH. Epigenetic mechanisms in tumorigenesis, tumor cell heterogeneity and drug resistance. Drug Resist Updat. 2012;15(1-2):21-38. doi: 10.1016/j.drup.2012.01.008
- Shah K, Rawal RM. Genetic and epigenetic modulation of drug resistance in cancer: challenges and opportunities. Curr Drug Metab. 2019;20(14):1114-1131. doi: 10.2174/1389200221666200103111539
- Mazloumi Z, Farahzadi R, Rafat A, et al. Effect of aberrant DNA methylation on cancer stem cell properties. Exp Mol Pathol. 2022;125:104757. doi: 10.1016/j.yexmp.2022.104757
- Zhao A, Xu W, Han R, et al. Role of histone modifications in neurogenesis and neurodegenerative disease development. Ageing Res Rev. 2024;98:102324. doi: 10.1016/j.arr.2024.102324
- Brock A, Chang H, Huang S. Non-genetic heterogeneity—a mutation-independent driving force for the somatic evolution of tumours. Nat Rev Genet. 2009;10(5):336-342. doi: 10.1038/nrg2556
- Hata AN, Niederst MJ, Archibald HL, et al. Tumor cells can follow distinct evolutionary paths to become resistant to epidermal growth factor receptor inhibition. Nat Med. 2016;22(3):262-269. doi: 10.1038/nm.4040
- Bai X, Fisher DE, Flaherty KT. Cell-state dynamics and therapeutic resistance in melanoma from the perspective of MITF and IFNγ pathways. Nat Rev Clin Oncol. 2019;16(9):549-562. doi: 10.1038/s41571-019-0204-6
- Knoechel B, Roderick JE, Williamson KE, et al. An epigenetic mechanism of resistance to targeted therapy in T cell acute lymphoblastic leukemia. Nat Genet. 2014;46(4):364-370. doi: 10.1038/ng.2913
- Sun C, Wang L, Huang S, et al. Reversible and adaptive resistance to BRAF(V600E) inhibition in melanoma. Nature. 2014;508(7494):118-122. doi: 10.1038/nature13121
- Li S, Garrett-Bakelman FE, Chung SS, et al. Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia. Nat Med. 2016;22(7):792-799. doi: 10.1038/nm.4125
- Bell CC, Fennell KA, Chan YC, et al. Targeting enhancer switching overcomes non-genetic drug resistance in acute myeloid leukaemia. Nat Commun. 2019;10(1):2723. doi: 10.1038/s41467-019-10652-9
- Shaffer SM, Dunagin MC, Torborg SR, et al. Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance. Nature. 2017;546(7695):431-435. doi: 10.1038/nature25162
- Kim C, Gao R, Sei E, et al. Chemoresistance evolution in triple-negative breast cancer delineated by single-cell sequencing. Cell. 2018;173(4):879-893.e13. doi: 10.1016/j.cell.2018.03.041
- Sharma A, Cao EY, Kumar V, et al. Longitudinal single-cell RNA sequencing reveals drug-induced infidelity in stem cell hierarchy. Nat Commun. 2018;9(1):4931. doi: 10.1038/s41467-018-07261-3
- Milanovic M, Fan DNY, Belenki D, et al. Senescence-associated reprogramming promotes cancer stemness. Nature. 2018;553(7686):96-100. doi: 10.1038/nature25167
- Paksa A, Rajagopal J. The epigenetic basis of cellular plasticity. Curr Opin Cell Biol. 2017;49:116-122. doi: 10.1016/j.ceb.2018.01.003
- Wainwright EN, Scaffidi P. Epigenetics and cancer stem cells: unleashing, hijacking, and restricting cellular plasticity. Trends Cancer. 2017;3(5):372-386. doi: 10.1016/j.trecan.2017.04.004
- Pisco AO, Brock A, Zhou J, et al. Non-Darwinian dynamics in therapy-induced cancer drug resistance. Nat Commun. 2013;4(1):2467. doi: 10.1038/ncomms3467
- Sharma SV, Lee DY, Li B, et al. A Chromatin-Mediated Reversible Drug-Tolerant State in Cancer Cell Subpopulations. Cell. 2010;141(1):69-80. doi: 10.1016/j.cell.2010.02.027
- Liau BB, Sievers C, Donohue LK, et al. Adaptive chromatin remodeling drives glioblastoma stem cell plasticity and drug tolerance. Cell Stem Cell. 2017;20(2):233-246.e7. doi: 10.1016/j.stem.2016.11.003
- Fong CY, Gilan O, Lam EYN, et al. BET inhibitor resistance emerges from leukaemia stem cells. Nature. 2015;525(7570):538-542. doi: 10.1038/nature14888
- Zawistowski JS, Bevill SM, Goulet DR, et al. Enhancer remodeling during adaptive bypass to MEK inhibition is attenuated by targeting the P-TEFb complex. Cancer Discov. 2017;7(3):302-321. doi: 10.1158/2159-8290.CD-16-0653
- Alhazza A, Oyegbesan A, Bousoik E, Montazeri Aliabadi H. Multidrug resistance: are we still afraid of the big bad wolf? Pharmaceuticals. 2025;18(6):895. doi: 10.3390/ph18060895
- Emran TB, Shahriar A, Mahmud AR, et al. Multidrug resistance in cancer: molecular mechanisms and therapeutic approaches. Front Oncol. 2022;12:891652. doi: 10.3389/fonc.2022.891652
- O’Connor MJ. Targeting the DNA damage response in cancer. Mol Cell. 2015;60(4):547-560. doi: 10.1016/j.molcel.2015.10.040
- Lord CJ, Ashworth A. PARP inhibitors: synthetic lethality in the clinic. Science. 2017;355(6330):1152-1158. doi: 10.1126/science.aam7344
- Roesch A, Vultur A, Bogeski I, et al. Overcoming intrinsic multidrug resistance in melanoma by blocking the mitochondrial respiratory chain of slow-cycling JARID1B(high) cells. Cancer Cell. 2013;23(6):811-825. doi: 10.1016/j.ccr.2013.05.003
- Das Thakur M, Salangsang F, Landman AS, et al. Modelling vemurafenib resistance in melanoma reveals a strategy to forestall drug resistance. Nature. 2013;494(7436):251-255. doi: 10.1038/nature11814
- Becker A, Crombag L, Heideman DA, et al. Retreatment with erlotinib: regain of TKI sensitivity following a drug holiday for NSCLC. Eur J Cancer. 2011;47(17):2603-2606. doi: 10.1016/j.ejca.2011.06.046
- Mittal K, Derosa L, Albiges L, et al. Drug holiday in metastatic renal-cell carcinoma patients treated with VEGFR inhibitors. Clin Genitourin Cancer. 2018;16(3):e663-e667. doi: 10.1016/j.clgc.2017.12.014
- Snyder V, Reed-Newman TC, Arnold L, Thomas SM, Anant S. Cancer stem cell metabolism and potential therapeutic targets. Front Oncol. 2018;8:203. doi: 10.3389/fonc.2018.00203
- Poljsak B, Milisav I. Clinical implications of cellular stress responses. Bosn J Basic Med Sci. 2012;12(2):122-126. doi: 10.17305/bjbms.2012.2510
- Etchegaray JP, Mostoslavsky R. Interplay between metabolism and epigenetics: a nuclear adaptation to environmental changes. Mol Cell. 2016;62(5):695-711. doi: 10.1016/j.molcel.2016.05.029
- de Magalhaes JP, Passos JF. Stress, cell senescence and organismal ageing. Mech Ageing Dev. 2018;170:2-9. doi: 10.1016/j.mad.2017.07.001
- Takahashi A, Ohtani N, Yamakoshi K, et al. Mitogenic signalling and the p16INK4a-Rb pathway cooperate to enforce irreversible cellular senescence. Nat Cell Biol. 2006;8(11):1291-1297. doi: 10.1038/ncb1491
- Koch CM, Reck K, Shao K, et al. Pluripotent stem cells escape from senescence-associated DNA methylation changes. Genome Res. 2013;23(2):248-259. doi: 10.1101/gr.141945.112
- Serrano M, Lin AW, McCurrach ME, Beach D, Lowe SW. Oncogenic ras provokes premature cell senescence associated with accumulation of p53 and p16INK4a. Cell. 1997;88(5):593-602. doi: 10.1016/S0092-8674(00)81902-9
- Bielak-Zmijewska A, Wnuk M, Przybylska D, et al. A comparison of replicative senescence and doxorubicin-induced premature senescence of vascular smooth muscle cells isolated from human aorta. Biogerontology. 2014;15(1):47-64. doi: 10.1007/s10522-013-9477-9
- Sakaki M, Ebihara Y, Okamura K, et al. Potential roles of DNA methylation in the initiation and establishment of replicative senescence revealed by array-based methylome and transcriptome analyses. Dante R, ed. PLoS ONE. 2017;12(2):e0171431. doi: 10.1371/journal.pone.0171431
- Shlyakhtina Y, Moran KL, Portal MM. Genetic and non-genetic mechanisms underlying cancer evolution. Cancers. 2021;13(6):1380. doi: 10.3390/cancers13061380
- McDonald OG, Li X, Saunders T, et al. Epigenomic reprogramming during pancreatic cancer progression links anabolic glucose metabolism to distant metastasis. Nat Genet. 2017;49(3):367-376. doi: 10.1038/ng.3753
- Sharma A, Merritt E, Hu X, et al. Non-genetic intra-tumor heterogeneity is a major predictor of phenotypic heterogeneity and ongoing evolutionary dynamics in lung tumors. Cell Rep. 2019;29(8):2164-2174.e. doi: 10.1016/j.celrep.2019.10.045
- Marusyk A, Almendro V, Polyak K. Intra-tumour heterogeneity: a looking glass for cancer? Nat Rev Cancer. 2012;12(5):323-334. doi: 10.1038/nrc3261
- Quintanal-Villalonga Á, Chan JM, Yu HA, et al. Lineage plasticity in cancer: a shared pathway of therapeutic resistance. Nat Rev Clin Oncol. 2020;17:360-371. doi: 10.1038/s41571-020-0355-5
- Gaiti F, Chaligne R, Gu H, et al. Epigenetic evolution and lineage histories of chronic lymphocytic leukaemia. Nature. 2019;569(7757):576-580. doi: 10.1038/s41586-019-1198-z
- Quintana E, Shackleton M, Foster HR, et al. Phenotypic heterogeneity among tumorigenic melanoma cells from patients is reversible and not hierarchically organized. Cancer Cell. 2010;18(5):510-523. doi: 10.1016/j.ccr.2010.10.012
- Roesch A, Fukunaga-Kalabis M, Schmidt EC, et al. A temporarily distinct subpopulation of slow-cycling melanoma cells is required for continuous tumor growth. Cell. 2010;141(4):583-594. doi: 10.1016/j.cell.2010.04.020
- Marjanovic ND, Hofree M, Chan JE, et al. Emergence of a high-plasticity cell state during lung cancer evolution. Cancer Cell. 2020;38(2):229-246.e13.
doi: 10.1016/j.ccell.2020.06.012 121. Pavet V, Shlyakhtina Y, He T, et al. Plasminogen activator urokinase expression reveals TRAIL responsiveness and supports fractional survival of cancer cells. Cell Death Dis. 2014;5(1):e1043. doi: 10.1038/cddis.2014.5
- Niculescu VF. The stem cell biology of the protist pathogen Entamoeba invadens in the context of eukaryotic stem cell evolution. Stem Cell Biol Res. 2015;2(1):2. doi: 10.7243/2054-717X-2-2
- Niculescu VF. Growth of Entamoeba invadens in sediments with metabolically repressed bacteria leads to multicellularity and redefinition of the amoebic cell system. Roum Arch Microbiol Immunol. 2013;72(1):25-48.
- Diamond LS. Axenic cultivation of Entamoeba histolytica. Science. 1961;134(3475):336-337. doi: 10.1126/science.134.3475.336
- Mukherjee C, Clark CG, Lohia A. Entamoeba shows reversible variation in ploidy under different growth conditions and between life cycle phases. PLoS Negl Trop Dis. 2008;2(8):e281. doi: 10.1371/journal.pntd.0000281
- Mukherjee C, Majumder S, Lohia A. Inter-cellular variation in DNA content of Entamoeba histolytica originates from temporal and spatial uncoupling of cytokinesis from the nuclear cycle. PLoS Negl Trop Dis. 2009;3(4):e409. doi: 10.1371/journal.pntd.0000409
- Salmina K, Huna A, Kalejs M, et al. The cancer aneuploidy paradox: in the light of evolution. Genes. 2019;10(2):83. doi: 10.3390/genes10020083
- Krishnan D, Ghosh SK. Cellular events of multinucleated giant cell formation during the encystation of Entamoeba invadens. Front Cell Infect Microbiol. 2018;8:262. doi: 10.3389/fcimb.2018.00262
- Craig CF. Studies upon the amebae in the intestine of man. J Infect Dis. 1908;5(3):324-377. doi: 10.1093/infdis/5.3.324
- Ashouri A, Zhang C, Gaiti F. Decoding cancer evolution: integrating genetic and non-genetic insights. Genes. 2023;14(10):1856. doi: 10.3390/genes14101856
- Hazra S, Dinda SK, Mondal NK, et al. Giant cells: multiple cells unite to survive. Front Cell Infect Microbiol. 2023;13:1220589. doi: 10.3389/fcimb.2023.1220589
